NeXtprot2RDF - Converting protein data to RDF

This project aims in providing open source tools to convert NeXtprot protein data to RDF.
It is meant as a case study in the context of the IMI project OpenPHACTS.

How it works

The conversion procedure is not neccessarily tied to the conversion of protein data.
Currently a multi-staged processing pipeline is being implemented using different components at the pipeline's various stages.


This project builds upon or uses some versatile tools already existing.
The table below provides an overview.

D2RQLhttp://d2rq.orgD2RQ Mapping Language is a declarative language for mapping relational database schemas to RDF vocabularies and OWL ontologies
NeXtoRGo toA template driven conversion tool based on Velocity and Velosurf