A E G H M O P S T

A

adler(Object) - Method in class org.openphacts.nextprot.util.HashTool

Creates an Adler23 checksum from the given content.

advance(Object) - Method in class org.openphacts.nextprot.util.EchoTool

Advances the progress meter by a certain amount.

advance() - Method in class org.openphacts.nextprot.util.EchoTool

Advances the progress meter by a single unit.

App - Class in org.openphacts.nextprot

Hello world!

App() - Constructor for class org.openphacts.nextprot.App

E

EchoTool - Class in org.openphacts.nextprot.util

EchoTool() - Constructor for class org.openphacts.nextprot.util.EchoTool

Creates the echo tool

G

getColumns() - Method in class org.openphacts.nextprot.util.EchoTool

Get the MaxCols value.

getMark() - Method in class org.openphacts.nextprot.util.EchoTool

Get the HashMark value.

H

HashTool - Class in org.openphacts.nextprot.util

HashTool() - Constructor for class org.openphacts.nextprot.util.HashTool

Creates a new HashTool.

M

main(String[]) - Static method in class org.openphacts.nextprot.App

main(String[]) - Static method in class org.openphacts.nextprot.TemplateAssembler

O

org.openphacts.nextprot - package org.openphacts.nextprot

org.openphacts.nextprot.util - package org.openphacts.nextprot.util

P

println(Object) - Method in class org.openphacts.nextprot.util.EchoTool

Prints a message to stdout.

processTemplates(File, File, Map) - Method in class org.openphacts.nextprot.TemplateAssembler

Process the template(s).

processTemplates(File) - Method in class org.openphacts.nextprot.TemplateAssembler

Process the template(s).

S

setColumns(Object) - Method in class org.openphacts.nextprot.util.EchoTool

Set the MaxCols value.

setMark(Object) - Method in class org.openphacts.nextprot.util.EchoTool

Set the HashMark value.

startProgress() - Method in class org.openphacts.nextprot.util.EchoTool

Resets the progress meter

T

TemplateAssembler - Class in org.openphacts.nextprot

TemplateAssembler() - Constructor for class org.openphacts.nextprot.TemplateAssembler

TemplateException - Exception in org.openphacts.nextprot

TemplateException signals exceptional states while processing templates Created: Mon Jun 4 21:22:18 2012

TemplateException(String) - Constructor for exception org.openphacts.nextprot.TemplateException

A E G H M O P S T